STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02629400Peptidase M18; Belongs to the peptidase M18 family. (563 aa)    
Predicted Functional Partners:
CKAN_02076900
Putative RNA polymerase II transcription factor B subunit 1-1 isoform X1.
    
   0.657
CKAN_02081100
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.603
CKAN_01559000
Autophagy-related protein.
   
 
 0.596
CKAN_01888900
Autophagy-related protein.
   
 
 0.596
CKAN_02450700
Autophagy-related protein.
   
 
 0.596
CKAN_01745600
Autophagy-related protein.
   
 
 0.596
CKAN_00073000
Endoribonuclease YbeY.
    
  0.541
CKAN_00485400
Putative Xaa-Pro aminopeptidase 3 isoform X3.
   
 
 0.535
CKAN_00055200
Putative Xaa-Pro aminopeptidase P; Belongs to the peptidase M24B family.
   
 
 0.523
CKAN_00623000
Uncharacterized protein; Belongs to the peptidase M24B family.
   
 
 0.523
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.