STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02637000SEC1 family transport protein SLY1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (629 aa)    
Predicted Functional Partners:
CKAN_02510800
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 0.984
CKAN_00111600
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 0.984
CKAN_02214800
Bet1-like protein SNARE 1-1.
   
 0.983
CKAN_00799400
Bet1-like protein SNARE 1-1.
   
 0.983
CKAN_00754200
Alpha-soluble NSF attachment protein.
    
 0.980
CKAN_00755400
Alpha-soluble NSF attachment protein.
    
 0.980
CKAN_01086500
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.979
CKAN_00729600
Syntaxin-31; Belongs to the syntaxin family.
    
 0.979
CKAN_02766200
Membrin-11.
    
 0.979
CKAN_00597800
Syntaxin-32-like protein; Belongs to the syntaxin family.
    
 0.979
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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