STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02675100Aldo_ket_red domain-containing protein. (328 aa)    
Predicted Functional Partners:
CKAN_02169100
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 
 0.885
CKAN_01904700
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 
 0.885
CKAN_02521800
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.848
CKAN_01182900
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.843
CKAN_00589600
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.843
CKAN_02242000
Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
    
 0.787
CKAN_01560000
Aldo-keto reductase family 4 member C9-like protein.
  
 0.738
CKAN_02033200
Protein transport protein SEC13 B-like protein; Belongs to the WD repeat SEC13 family.
    
 0.730
CKAN_01155800
Protein transport protein SEC13 B-like protein; Belongs to the WD repeat SEC13 family.
    
 0.730
CKAN_00847000
Serine--glyoxylate aminotransferase.
   
 
  0.703
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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