Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKAN_00224000 | CKAN_01500800 | A0A3S3N723 | A0A3S3QL30 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Serine/arginine repetitive matrix protein 1-like protein. | 0.960 |
CKAN_00224000 | CKAN_02309400 | A0A3S3N723 | A0A3S3R3D0 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Splicing factor 3A subunit 2. | 0.906 |
CKAN_00224000 | CKAN_02585400 | A0A3S3N723 | A0A3S3N5U5 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Splicing factor SF3a60. | 0.909 |
CKAN_00224000 | CKAN_02677200 | A0A3S3N723 | A0A443Q2U5 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7. | Splicing factor, suppressor of white-apricot isoform X1. | 0.441 |
CKAN_00315300 | CKAN_01396700 | A0A443N8D9 | A0A3S3QHH1 | TSL-kinase interacting protein 1. | Nucleolar protein 58. | 0.453 |
CKAN_00315300 | CKAN_01429800 | A0A443N8D9 | A0A443P3R6 | TSL-kinase interacting protein 1. | Protein kinase domain-containing protein. | 0.559 |
CKAN_00315300 | CKAN_02677200 | A0A443N8D9 | A0A443Q2U5 | TSL-kinase interacting protein 1. | Splicing factor, suppressor of white-apricot isoform X1. | 0.453 |
CKAN_01176600 | CKAN_01396700 | A0A443NX15 | A0A3S3QHH1 | TSL-kinase interacting protein 1-like protein. | Nucleolar protein 58. | 0.407 |
CKAN_01176600 | CKAN_01429800 | A0A443NX15 | A0A443P3R6 | TSL-kinase interacting protein 1-like protein. | Protein kinase domain-containing protein. | 0.490 |
CKAN_01176600 | CKAN_02677200 | A0A443NX15 | A0A443Q2U5 | TSL-kinase interacting protein 1-like protein. | Splicing factor, suppressor of white-apricot isoform X1. | 0.407 |
CKAN_01396700 | CKAN_00315300 | A0A3S3QHH1 | A0A443N8D9 | Nucleolar protein 58. | TSL-kinase interacting protein 1. | 0.453 |
CKAN_01396700 | CKAN_01176600 | A0A3S3QHH1 | A0A443NX15 | Nucleolar protein 58. | TSL-kinase interacting protein 1-like protein. | 0.407 |
CKAN_01396700 | CKAN_01429800 | A0A3S3QHH1 | A0A443P3R6 | Nucleolar protein 58. | Protein kinase domain-containing protein. | 0.454 |
CKAN_01396700 | CKAN_01500800 | A0A3S3QHH1 | A0A3S3QL30 | Nucleolar protein 58. | Serine/arginine repetitive matrix protein 1-like protein. | 0.625 |
CKAN_01396700 | CKAN_02585400 | A0A3S3QHH1 | A0A3S3N5U5 | Nucleolar protein 58. | Splicing factor SF3a60. | 0.456 |
CKAN_01396700 | CKAN_02677200 | A0A3S3QHH1 | A0A443Q2U5 | Nucleolar protein 58. | Splicing factor, suppressor of white-apricot isoform X1. | 0.637 |
CKAN_01429800 | CKAN_00315300 | A0A443P3R6 | A0A443N8D9 | Protein kinase domain-containing protein. | TSL-kinase interacting protein 1. | 0.559 |
CKAN_01429800 | CKAN_01176600 | A0A443P3R6 | A0A443NX15 | Protein kinase domain-containing protein. | TSL-kinase interacting protein 1-like protein. | 0.490 |
CKAN_01429800 | CKAN_01396700 | A0A443P3R6 | A0A3S3QHH1 | Protein kinase domain-containing protein. | Nucleolar protein 58. | 0.454 |
CKAN_01429800 | CKAN_02677200 | A0A443P3R6 | A0A443Q2U5 | Protein kinase domain-containing protein. | Splicing factor, suppressor of white-apricot isoform X1. | 0.428 |
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