STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02697300ATP synthase subunit b', chloroplastic; Belongs to the ATPase B chain family. (216 aa)    
Predicted Functional Partners:
CKAN_01893100
ATP synthase delta chain, chloroplastic.
   
 0.992
CKAN_02602600
ATP synthase gamma chain, chloroplastic.
   
 0.991
CKAN_02783900
ATP synthase F0, A subunit; Belongs to the universal ribosomal protein uS2 family.
    
 0.990
CKAN_02786300
ATP synthase CF0 subunit IV chloroplast.
    
 0.990
CKAN_00922500
ATP synthase subunit delta', mitochondrial-like protein.
    
 0.986
CKAN_02737700
ATP synthase subunit beta, chloroplastic-like protein.
    
 0.980
CKAN_02723400
ATP synthase subunit beta, chloroplastic-like protein.
    
 0.980
atpA
ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
 0.979
CKAN_01568000
Pentatricopeptide repeat.
    
 0.979
CKAN_02723800
ATP synthase CF0 subunit I chloroplast; Belongs to the ATPase B chain family.
    
 0.979
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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