STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02725400PPM-type phosphatase domain-containing protein. (377 aa)    
Predicted Functional Partners:
CKAN_02416900
Formyl transferase.
  
   0.594
CKAN_01146300
Abscisic acid receptor PYL2-like protein.
    
  0.554
CKAN_00187700
Abscisic acid receptor PYL2.
    
  0.554
CKAN_01966200
TNF receptor-associated factor family protein isoform X2.
   
 0.498
CKAN_01820100
Protein SPA1-RELATED 3-like protein isoform X2.
   
 0.498
CKAN_00917000
E3 ubiquitin-protein ligase COP1.
   
 0.498
CKAN_01533300
Protein SPA1-RELATED 3-like protein isoform X2.
   
 0.498
CKAN_01930100
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X1.
   
 0.484
CKAN_01634700
Abscisic acid receptor PYR1.
    
 0.478
CKAN_00889600
Abscisic acid receptor PYL8-like protein.
    
  0.474
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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