STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAN_02782800Acetyl-CoA carboxylase carboxyltransferase beta subunit chloroplast. (119 aa)    
Predicted Functional Partners:
CKAN_02070800
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.989
CKAN_02528700
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.988
CKAN_01091300
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
 
 0.987
CKAN_01765600
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.957
CKAN_00493900
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.886
CKAN_01260500
2-isopropylmalate synthase A-like protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.885
CKAN_01930100
2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial isoform X1.
  
 
 0.880
CKAN_01517600
Acyl-coenzyme A oxidase 4, peroxisomal.
  
 
 0.873
CKAN_00313500
Pyruvate carboxyltransferase.
  
 0.864
CKAN_00440100
Hydroxymethylglutaryl-CoA lyase, mitochondrial-like protein isoform X1.
  
 0.864
Your Current Organism:
Cinnamomum micranthum
NCBI taxonomy Id: 337451
Other names: C. micranthum f. kanehirae, Cinnamomum kanehirae, Cinnamomum kanehirae Hayata, Cinnamomum kanehirai, Cinnamomum micranthum f. kanehirae, Cinnamomum micranthum f. kanehirae (Hayata) S.S.Ying, Cinnamomum micranthum f. kanehirai
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