Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK98918.1 | SHL00698.1 | SAMN05444398_101210 | SAMN05444398_101273 | Hypothetical protein. | beta-N-acetylhexosaminidase. | 0.605 |
SHK98918.1 | SHL37642.1 | SAMN05444398_101210 | SAMN05444398_102172 | Hypothetical protein. | Outer membrane transport energization protein ExbD. | 0.515 |
SHK98918.1 | SHL37674.1 | SAMN05444398_101210 | SAMN05444398_102173 | Hypothetical protein. | Biopolymer transport protein ExbD. | 0.515 |
SHK98918.1 | SHL90779.1 | SAMN05444398_101210 | SAMN05444398_10761 | Hypothetical protein. | Hypothetical protein. | 0.710 |
SHK98918.1 | SHL98446.1 | SAMN05444398_101210 | SAMN05444398_10863 | Hypothetical protein. | Cell division and transport-associated protein TolR. | 0.515 |
SHK98918.1 | SHM44758.1 | SAMN05444398_101210 | SAMN05444398_1176 | Hypothetical protein. | Chemotaxis protein MotB. | 0.555 |
SHK98918.1 | SHM54016.1 | SAMN05444398_101210 | SAMN05444398_12112 | Hypothetical protein. | Outer membrane transport energization protein ExbD. | 0.515 |
SHK98918.1 | guaA | SAMN05444398_101210 | SAMN05444398_101105 | Hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.663 |
SHK98918.1 | rbfA | SAMN05444398_101210 | SAMN05444398_11438 | Hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.521 |
SHK98918.1 | tolB | SAMN05444398_101210 | SAMN05444398_10865 | Hypothetical protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.814 |
SHL00698.1 | SHK98918.1 | SAMN05444398_101273 | SAMN05444398_101210 | beta-N-acetylhexosaminidase. | Hypothetical protein. | 0.605 |
SHL37642.1 | SHK98918.1 | SAMN05444398_102172 | SAMN05444398_101210 | Outer membrane transport energization protein ExbD. | Hypothetical protein. | 0.515 |
SHL37642.1 | SHL37674.1 | SAMN05444398_102172 | SAMN05444398_102173 | Outer membrane transport energization protein ExbD. | Biopolymer transport protein ExbD. | 0.955 |
SHL37642.1 | SHM44758.1 | SAMN05444398_102172 | SAMN05444398_1176 | Outer membrane transport energization protein ExbD. | Chemotaxis protein MotB. | 0.486 |
SHL37674.1 | SHK98918.1 | SAMN05444398_102173 | SAMN05444398_101210 | Biopolymer transport protein ExbD. | Hypothetical protein. | 0.515 |
SHL37674.1 | SHL37642.1 | SAMN05444398_102173 | SAMN05444398_102172 | Biopolymer transport protein ExbD. | Outer membrane transport energization protein ExbD. | 0.955 |
SHL37674.1 | SHM44758.1 | SAMN05444398_102173 | SAMN05444398_1176 | Biopolymer transport protein ExbD. | Chemotaxis protein MotB. | 0.486 |
SHL90779.1 | SHK98918.1 | SAMN05444398_10761 | SAMN05444398_101210 | Hypothetical protein. | Hypothetical protein. | 0.710 |
SHL98446.1 | SHK98918.1 | SAMN05444398_10863 | SAMN05444398_101210 | Cell division and transport-associated protein TolR. | Hypothetical protein. | 0.515 |
SHL98446.1 | SHM44758.1 | SAMN05444398_10863 | SAMN05444398_1176 | Cell division and transport-associated protein TolR. | Chemotaxis protein MotB. | 0.486 |
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