Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK93645.1 | SHL11544.1 | SAMN05444398_10129 | SAMN05444398_101639 | Ppx/GppA phosphatase. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.941 |
SHK93645.1 | SHM04349.1 | SAMN05444398_10129 | SAMN05444398_10921 | Ppx/GppA phosphatase. | GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.949 |
SHK93645.1 | polA | SAMN05444398_10129 | SAMN05444398_103255 | Ppx/GppA phosphatase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.432 |
SHK93645.1 | ppk | SAMN05444398_10129 | SAMN05444398_101638 | Ppx/GppA phosphatase. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.890 |
SHL11424.1 | SHL11454.1 | SAMN05444398_101636 | SAMN05444398_101637 | Predicted PurR-regulated permease PerM. | Hypothetical protein. | 0.961 |
SHL11424.1 | SHL11544.1 | SAMN05444398_101636 | SAMN05444398_101639 | Predicted PurR-regulated permease PerM. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.665 |
SHL11424.1 | ppk | SAMN05444398_101636 | SAMN05444398_101638 | Predicted PurR-regulated permease PerM. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.743 |
SHL11424.1 | proS | SAMN05444398_101636 | SAMN05444398_101635 | Predicted PurR-regulated permease PerM. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.692 |
SHL11454.1 | SHL11424.1 | SAMN05444398_101637 | SAMN05444398_101636 | Hypothetical protein. | Predicted PurR-regulated permease PerM. | 0.961 |
SHL11454.1 | SHL11544.1 | SAMN05444398_101637 | SAMN05444398_101639 | Hypothetical protein. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.665 |
SHL11454.1 | SHL86381.1 | SAMN05444398_101637 | SAMN05444398_106177 | Hypothetical protein. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.486 |
SHL11454.1 | polA | SAMN05444398_101637 | SAMN05444398_103255 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.486 |
SHL11454.1 | ppk | SAMN05444398_101637 | SAMN05444398_101638 | Hypothetical protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.780 |
SHL11454.1 | proS | SAMN05444398_101637 | SAMN05444398_101635 | Hypothetical protein. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro); Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 2 subfamily. | 0.692 |
SHL11544.1 | SHK93645.1 | SAMN05444398_101639 | SAMN05444398_10129 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Ppx/GppA phosphatase. | 0.941 |
SHL11544.1 | SHL11424.1 | SAMN05444398_101639 | SAMN05444398_101636 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Predicted PurR-regulated permease PerM. | 0.665 |
SHL11544.1 | SHL11454.1 | SAMN05444398_101639 | SAMN05444398_101637 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Hypothetical protein. | 0.665 |
SHL11544.1 | SHL86381.1 | SAMN05444398_101639 | SAMN05444398_106177 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. | 0.523 |
SHL11544.1 | SHM04349.1 | SAMN05444398_101639 | SAMN05444398_10921 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.944 |
SHL11544.1 | SHM25175.1 | SAMN05444398_101639 | SAMN05444398_11247 | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | Hypothetical protein. | 0.534 |
page 1 of 3