Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK94023.1 | SHL17684.1 | SAMN05444398_10145 | SAMN05444398_101865 | Thiamine-phosphate pyrophosphorylase. | Protein of unknown function. | 0.478 |
SHK94023.1 | SHM38999.1 | SAMN05444398_10145 | SAMN05444398_11548 | Thiamine-phosphate pyrophosphorylase. | Hydroxymethylpyrimidine kinase. | 0.989 |
SHL17636.1 | SHL17657.1 | SAMN05444398_101863 | SAMN05444398_101864 | Hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.773 |
SHL17636.1 | SHL17684.1 | SAMN05444398_101863 | SAMN05444398_101865 | Hypothetical protein. | Protein of unknown function. | 0.422 |
SHL17657.1 | SHL17636.1 | SAMN05444398_101864 | SAMN05444398_101863 | Integrase; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.773 |
SHL17657.1 | SHL17684.1 | SAMN05444398_101864 | SAMN05444398_101865 | Integrase; Belongs to the 'phage' integrase family. | Protein of unknown function. | 0.422 |
SHL17684.1 | SHK94023.1 | SAMN05444398_101865 | SAMN05444398_10145 | Protein of unknown function. | Thiamine-phosphate pyrophosphorylase. | 0.478 |
SHL17684.1 | SHL17636.1 | SAMN05444398_101865 | SAMN05444398_101863 | Protein of unknown function. | Hypothetical protein. | 0.422 |
SHL17684.1 | SHL17657.1 | SAMN05444398_101865 | SAMN05444398_101864 | Protein of unknown function. | Integrase; Belongs to the 'phage' integrase family. | 0.422 |
SHL17684.1 | SHL22956.1 | SAMN05444398_101865 | SAMN05444398_1011081 | Protein of unknown function. | Hypothetical protein. | 0.453 |
SHL17684.1 | SHL36194.1 | SAMN05444398_101865 | SAMN05444398_102125 | Protein of unknown function. | Biotin/methionine sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.566 |
SHL17684.1 | SHM38999.1 | SAMN05444398_101865 | SAMN05444398_11548 | Protein of unknown function. | Hydroxymethylpyrimidine kinase. | 0.438 |
SHL17684.1 | aroB | SAMN05444398_101865 | SAMN05444398_101409 | Protein of unknown function. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.499 |
SHL17684.1 | aroE | SAMN05444398_101865 | SAMN05444398_106160 | Protein of unknown function. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.499 |
SHL17684.1 | ndk | SAMN05444398_101865 | SAMN05444398_1247 | Protein of unknown function. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.566 |
SHL17684.1 | surE | SAMN05444398_101865 | SAMN05444398_101396 | Protein of unknown function. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.423 |
SHL22956.1 | SHL17684.1 | SAMN05444398_1011081 | SAMN05444398_101865 | Hypothetical protein. | Protein of unknown function. | 0.453 |
SHL36194.1 | SHL17684.1 | SAMN05444398_102125 | SAMN05444398_101865 | Biotin/methionine sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Protein of unknown function. | 0.566 |
SHM38999.1 | SHK94023.1 | SAMN05444398_11548 | SAMN05444398_10145 | Hydroxymethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase. | 0.989 |
SHM38999.1 | SHL17684.1 | SAMN05444398_11548 | SAMN05444398_101865 | Hydroxymethylpyrimidine kinase. | Protein of unknown function. | 0.438 |
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