Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK95831.1 | SHL37902.1 | SAMN05444398_101106 | SAMN05444398_102181 | Permease of the drug/metabolite transporter (DMT) superfamily. | EamA-like transporter family protein. | 0.709 |
SHK95831.1 | SHM43368.1 | SAMN05444398_101106 | SAMN05444398_11648 | Permease of the drug/metabolite transporter (DMT) superfamily. | Threonine/homoserine efflux transporter RhtA. | 0.742 |
SHL37845.1 | SHL37871.1 | SAMN05444398_102179 | SAMN05444398_102180 | Outer membrane receptor proteins, mostly Fe transport. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.759 |
SHL37845.1 | SHL37902.1 | SAMN05444398_102179 | SAMN05444398_102181 | Outer membrane receptor proteins, mostly Fe transport. | EamA-like transporter family protein. | 0.558 |
SHL37871.1 | SHL37845.1 | SAMN05444398_102180 | SAMN05444398_102179 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | Outer membrane receptor proteins, mostly Fe transport. | 0.759 |
SHL37871.1 | SHL37902.1 | SAMN05444398_102180 | SAMN05444398_102181 | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | EamA-like transporter family protein. | 0.621 |
SHL37902.1 | SHK95831.1 | SAMN05444398_102181 | SAMN05444398_101106 | EamA-like transporter family protein. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.709 |
SHL37902.1 | SHL37845.1 | SAMN05444398_102181 | SAMN05444398_102179 | EamA-like transporter family protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.558 |
SHL37902.1 | SHL37871.1 | SAMN05444398_102181 | SAMN05444398_102180 | EamA-like transporter family protein. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.621 |
SHL37902.1 | SHM43368.1 | SAMN05444398_102181 | SAMN05444398_11648 | EamA-like transporter family protein. | Threonine/homoserine efflux transporter RhtA. | 0.735 |
SHM43368.1 | SHK95831.1 | SAMN05444398_11648 | SAMN05444398_101106 | Threonine/homoserine efflux transporter RhtA. | Permease of the drug/metabolite transporter (DMT) superfamily. | 0.742 |
SHM43368.1 | SHL37902.1 | SAMN05444398_11648 | SAMN05444398_102181 | Threonine/homoserine efflux transporter RhtA. | EamA-like transporter family protein. | 0.735 |