STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL59624.1Copper chaperone NosL. (188 aa)    
Predicted Functional Partners:
SHL59535.1
Nitrous oxidase accessory protein.
 
 
 0.999
SHL59592.1
Cu-processing system permease protein.
 
 
 0.999
SHL59564.1
Cu-processing system ATP-binding protein.
 
 
 0.984
SHL59477.1
NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator.
 
  
 0.979
nosZ
Nitrous oxide reductase apoprotein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
  
 0.978
SHL59653.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.965
SHM58275.1
NosR/NirI family transcriptional regulator, nitrite reductase regulator.
 
  
 0.911
SHM58418.1
Nitric oxide reductase NorD protein.
 
    0.853
SHL59446.1
Protein of unknown function.
       0.789
SHL54839.1
ABC-2 type transport system ATP-binding protein.
  
 
 0.726
Your Current Organism:
Roseovarius pacificus
NCBI taxonomy Id: 337701
Other names: CGMCC 1.7083, DSM 29589, LMG 24575, LMG:24575, MCCC 1A00293, R. pacificus, Roseobacter sp. 812, Roseovarius pacificus Wang et al. 2009, strain 81-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.