STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM04135.1Tellurite resistance protein. (321 aa)    
Predicted Functional Partners:
SHM04101.1
Hypothetical protein.
 
     0.802
SHM04171.1
Fumarylpyruvate hydrolase.
       0.508
SHK94140.1
Thiosulfate reductase cytochrome b subunit.
 
     0.507
SHK94166.1
Octaheme c-type cytochrome, tetrathionate reductase family.
 
     0.476
SHL23417.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
    0.465
SHK93039.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
    0.465
SHL36612.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
    0.465
SHL66908.1
Putative redox protein.
 
     0.459
SHM04080.1
Hypothetical protein.
       0.408
SHL10889.1
Rhodanese-related sulfurtransferase.
 
   
 0.404
Your Current Organism:
Roseovarius pacificus
NCBI taxonomy Id: 337701
Other names: CGMCC 1.7083, DSM 29589, LMG 24575, LMG:24575, MCCC 1A00293, R. pacificus, Roseobacter sp. 812, Roseovarius pacificus Wang et al. 2009, strain 81-2
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