STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM14720.1Transcriptional regulator, BadM/Rrf2 family. (155 aa)    
Predicted Functional Partners:
SHK97249.1
Cysteine desulfurase.
  
 
 0.889
SHL03265.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.859
SHK98485.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
  
 0.806
SHL91651.1
Flagellar motor switch protein FliG.
    
   0.701
SHK97310.1
Transcriptional regulator, BadM/Rrf2 family.
  
     0.688
SHM14836.1
Sulfate transport system permease protein.
 
   
 0.626
SHM14748.1
Sulfate transport system substrate-binding protein.
 
     0.624
SHM14777.1
Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
     0.613
SHM14870.1
Sulfate transport system ATP-binding protein; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
 
     0.566
SHL20616.1
Transcriptional regulator, BadM/Rrf2 family.
  
   
 0.502
Your Current Organism:
Roseovarius pacificus
NCBI taxonomy Id: 337701
Other names: CGMCC 1.7083, DSM 29589, LMG 24575, LMG:24575, MCCC 1A00293, R. pacificus, Roseobacter sp. 812, Roseovarius pacificus Wang et al. 2009, strain 81-2
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