Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHL21184.1 | SHM25236.1 | SAMN05444398_1011012 | SAMN05444398_11249 | AraC-type DNA-binding protein. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.415 |
| SHL21184.1 | rpoD | SAMN05444398_1011012 | SAMN05444398_101832 | AraC-type DNA-binding protein. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.423 |
| SHL34969.1 | SHL37964.1 | SAMN05444398_10289 | SAMN05444398_102183 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.702 |
| SHL34969.1 | SHL38590.1 | SAMN05444398_10289 | SAMN05444398_102204 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.593 |
| SHL34969.1 | SHM25236.1 | SAMN05444398_10289 | SAMN05444398_11249 | Transcriptional regulator, AraC family. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.641 |
| SHL34969.1 | rpoD | SAMN05444398_10289 | SAMN05444398_101832 | Transcriptional regulator, AraC family. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.423 |
| SHL37964.1 | SHL34969.1 | SAMN05444398_102183 | SAMN05444398_10289 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.702 |
| SHL37964.1 | SHM25236.1 | SAMN05444398_102183 | SAMN05444398_11249 | Transcriptional regulator, AraC family. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.629 |
| SHL37964.1 | rpoD | SAMN05444398_102183 | SAMN05444398_101832 | Transcriptional regulator, AraC family. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.423 |
| SHL38590.1 | SHL34969.1 | SAMN05444398_102204 | SAMN05444398_10289 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family. | 0.593 |
| SHL38590.1 | SHM25236.1 | SAMN05444398_102204 | SAMN05444398_11249 | Transcriptional regulator, AraC family. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.489 |
| SHL38590.1 | rpoD | SAMN05444398_102204 | SAMN05444398_101832 | Transcriptional regulator, AraC family. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.423 |
| SHL90539.1 | SHL90563.1 | SAMN05444398_10752 | SAMN05444398_10753 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.999 |
| SHL90539.1 | SHM25236.1 | SAMN05444398_10752 | SAMN05444398_11249 | Sarcosine oxidase subunit delta. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.521 |
| SHL90539.1 | SHM25289.1 | SAMN05444398_10752 | SAMN05444398_11251 | Sarcosine oxidase subunit delta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.992 |
| SHL90563.1 | SHL90539.1 | SAMN05444398_10753 | SAMN05444398_10752 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit delta. | 0.999 |
| SHL90563.1 | SHM25236.1 | SAMN05444398_10753 | SAMN05444398_11249 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.428 |
| SHL90563.1 | SHM25289.1 | SAMN05444398_10753 | SAMN05444398_11251 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.985 |
| SHM25236.1 | SHL21184.1 | SAMN05444398_11249 | SAMN05444398_1011012 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | AraC-type DNA-binding protein. | 0.415 |
| SHM25236.1 | SHL34969.1 | SAMN05444398_11249 | SAMN05444398_10289 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | Transcriptional regulator, AraC family. | 0.641 |
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