STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZ_2Beta-galactosidase/beta-glucuronidase. (1117 aa)    
Predicted Functional Partners:
lacZ_1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 
0.737
lacZ_7
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.720
lacZ_9
Beta-galactosidase/beta-glucuronidase.
  
  
 
0.719
lacZ_4
Putative beta-galactosidase.
  
  
 
0.705
ebgA_2
Beta-galactosidase.
  
  
 
0.704
bga
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.697
CUN71269.1
Phosphotransferase enzyme family.
  
    0.678
xylA
Putative xylose isomerase; Belongs to the xylose isomerase family.
     
 0.638
CUN71175.1
Transporter.
  
    0.595
lacZ_3
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.580
Your Current Organism:
Bacteroides finegoldii
NCBI taxonomy Id: 338188
Other names: B. finegoldii, Bacteroides finegoldii Bakir et al. 2006, DSM 17565, JCM 13345, strain 199
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