STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO03074.1Uncharacterised protein. (101 aa)    
Predicted Functional Partners:
CUO03165.1
Uncharacterised protein.
       0.745
CUO03295.1
Uncharacterised protein.
       0.724
CUO03114.1
Uncharacterised protein.
       0.723
CUO03251.1
Uncharacterised protein.
       0.723
CUO03353.1
Uncharacterised protein.
       0.723
CUO03050.1
Uncharacterised protein.
       0.721
CUO03015.1
Uncharacterised protein.
       0.626
CUO03394.1
Integrase core domain.
       0.619
CUO03435.1
Uncharacterised protein.
       0.595
CUO03488.1
Uncharacterised protein.
       0.595
Your Current Organism:
Bacteroides finegoldii
NCBI taxonomy Id: 338188
Other names: B. finegoldii, Bacteroides finegoldii Bakir et al. 2006, DSM 17565, JCM 13345, strain 199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.