STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO24046.1WGR domain-containing protein. (357 aa)    
Predicted Functional Partners:
CUO23985.1
ATP-grasp domain.
 
    0.962
CUO23840.1
Phosphoglycolate phosphatase.
 
    0.961
CUO23934.1
Sulfatase.
 
    0.961
hemN_2
Coproporphyrinogen III oxidase%2C anaerobic.
 
    0.952
CUN76476.1
Beta-xylosidase.
  
     0.577
CUN73831.1
Chitin deacetylase.
  
     0.559
CUO73967.1
Putative endonuclease/exonuclease/phosphatase family protein.
  
     0.514
CUN63974.1
Putative transmembrane protein.
  
     0.494
CUO60294.1
Putative transmembrane protein.
  
     0.491
CUO67261.1
Domain of uncharacterised function (DUF1735).
  
     0.457
Your Current Organism:
Bacteroides finegoldii
NCBI taxonomy Id: 338188
Other names: B. finegoldii, Bacteroides finegoldii Bakir et al. 2006, DSM 17565, JCM 13345, strain 199
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.