Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUO32414.1 | CUO32455.1 | ERS852397_01784 | ERS852397_01785 | Peptidase family M49. | DNA alkylation repair enzyme. | 0.863 |
CUO32414.1 | CUO32573.1 | ERS852397_01784 | ERS852397_01788 | Peptidase family M49. | Peptidase membrane zinc metallopeptidase. | 0.413 |
CUO32414.1 | fur | ERS852397_01784 | ERS852397_01786 | Peptidase family M49. | Iron uptake transcriptional regulator; Belongs to the Fur family. | 0.672 |
CUO32414.1 | hisS | ERS852397_01784 | ERS852397_01789 | Peptidase family M49. | Putative histidyl-tRNA synthetase. | 0.423 |
CUO32414.1 | purA | ERS852397_01784 | ERS852397_01787 | Peptidase family M49. | Putative adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.756 |
CUO32455.1 | CUO32414.1 | ERS852397_01785 | ERS852397_01784 | DNA alkylation repair enzyme. | Peptidase family M49. | 0.863 |
CUO32455.1 | CUO32573.1 | ERS852397_01785 | ERS852397_01788 | DNA alkylation repair enzyme. | Peptidase membrane zinc metallopeptidase. | 0.444 |
CUO32455.1 | fur | ERS852397_01785 | ERS852397_01786 | DNA alkylation repair enzyme. | Iron uptake transcriptional regulator; Belongs to the Fur family. | 0.671 |
CUO32455.1 | purA | ERS852397_01785 | ERS852397_01787 | DNA alkylation repair enzyme. | Putative adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.671 |
CUO32573.1 | CUO32414.1 | ERS852397_01788 | ERS852397_01784 | Peptidase membrane zinc metallopeptidase. | Peptidase family M49. | 0.413 |
CUO32573.1 | CUO32455.1 | ERS852397_01788 | ERS852397_01785 | Peptidase membrane zinc metallopeptidase. | DNA alkylation repair enzyme. | 0.444 |
CUO32573.1 | fur | ERS852397_01788 | ERS852397_01786 | Peptidase membrane zinc metallopeptidase. | Iron uptake transcriptional regulator; Belongs to the Fur family. | 0.663 |
CUO32573.1 | hisS | ERS852397_01788 | ERS852397_01789 | Peptidase membrane zinc metallopeptidase. | Putative histidyl-tRNA synthetase. | 0.683 |
CUO32573.1 | purA | ERS852397_01788 | ERS852397_01787 | Peptidase membrane zinc metallopeptidase. | Putative adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.662 |
fur | CUO32414.1 | ERS852397_01786 | ERS852397_01784 | Iron uptake transcriptional regulator; Belongs to the Fur family. | Peptidase family M49. | 0.672 |
fur | CUO32455.1 | ERS852397_01786 | ERS852397_01785 | Iron uptake transcriptional regulator; Belongs to the Fur family. | DNA alkylation repair enzyme. | 0.671 |
fur | CUO32573.1 | ERS852397_01786 | ERS852397_01788 | Iron uptake transcriptional regulator; Belongs to the Fur family. | Peptidase membrane zinc metallopeptidase. | 0.663 |
fur | hisS | ERS852397_01786 | ERS852397_01789 | Iron uptake transcriptional regulator; Belongs to the Fur family. | Putative histidyl-tRNA synthetase. | 0.437 |
fur | purA | ERS852397_01786 | ERS852397_01787 | Iron uptake transcriptional regulator; Belongs to the Fur family. | Putative adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.835 |
hisS | CUO32414.1 | ERS852397_01789 | ERS852397_01784 | Putative histidyl-tRNA synthetase. | Peptidase family M49. | 0.423 |
page 1 of 2