Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
frlD | gmuF_1 | ERS852397_01836 | ERS852397_00266 | Fructokinase. | Mannose-6-phosphate isomerase. | 0.878 |
frlD | nagB_1 | ERS852397_01836 | ERS852397_00241 | Fructokinase. | Putative glucosamine-6-phosphate deaminase. | 0.901 |
frlD | nagB_2 | ERS852397_01836 | ERS852397_00786 | Fructokinase. | Putative glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.879 |
frlD | pfkA | ERS852397_01836 | ERS852397_00090 | Fructokinase. | Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.880 |
frlD | pfkA2 | ERS852397_01836 | ERS852397_00934 | Fructokinase. | Putative 6-phosphofructokinase 2; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.880 |
frlD | pgiA | ERS852397_01836 | ERS852397_00416 | Fructokinase. | Putative glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.890 |
frlD | sacA | ERS852397_01836 | ERS852397_01833 | Fructokinase. | Glycosylhydrolase. | 0.943 |
frlD | sacC | ERS852397_01836 | ERS852397_01834 | Fructokinase. | 2%2C6-beta-D-fructofuranosidase; Belongs to the glycosyl hydrolase 32 family. | 0.973 |
frlD | xylA | ERS852397_01836 | ERS852397_01287 | Fructokinase. | Putative xylose isomerase; Belongs to the xylose isomerase family. | 0.884 |
frlD | ydjH_1 | ERS852397_01836 | ERS852397_00865 | Fructokinase. | Fructokinase. | 0.932 |
gmuF_1 | frlD | ERS852397_00266 | ERS852397_01836 | Mannose-6-phosphate isomerase. | Fructokinase. | 0.878 |
gmuF_1 | nagB_1 | ERS852397_00266 | ERS852397_00241 | Mannose-6-phosphate isomerase. | Putative glucosamine-6-phosphate deaminase. | 0.901 |
gmuF_1 | nagB_2 | ERS852397_00266 | ERS852397_00786 | Mannose-6-phosphate isomerase. | Putative glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.880 |
gmuF_1 | pfkA | ERS852397_00266 | ERS852397_00090 | Mannose-6-phosphate isomerase. | Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.882 |
gmuF_1 | pfkA2 | ERS852397_00266 | ERS852397_00934 | Mannose-6-phosphate isomerase. | Putative 6-phosphofructokinase 2; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. | 0.882 |
gmuF_1 | pgiA | ERS852397_00266 | ERS852397_00416 | Mannose-6-phosphate isomerase. | Putative glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.932 |
gmuF_1 | xylA | ERS852397_00266 | ERS852397_01287 | Mannose-6-phosphate isomerase. | Putative xylose isomerase; Belongs to the xylose isomerase family. | 0.438 |
gmuF_1 | ydjH_1 | ERS852397_00266 | ERS852397_00865 | Mannose-6-phosphate isomerase. | Fructokinase. | 0.878 |
nagB_1 | frlD | ERS852397_00241 | ERS852397_01836 | Putative glucosamine-6-phosphate deaminase. | Fructokinase. | 0.901 |
nagB_1 | gmuF_1 | ERS852397_00241 | ERS852397_00266 | Putative glucosamine-6-phosphate deaminase. | Mannose-6-phosphate isomerase. | 0.901 |
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