STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltD_2Glutamate synthase small subunit. (446 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit.
 0.999
CUN86655.1
Abi-like protein.
    
 0.984
boxA
Putative ferredoxin.
  
 0.943
porA_2
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.937
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.915
purF_2
Putative phosphoribosylpyrophosphate amidotransferase.
  
 
 0.909
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
 
 0.909
gltD_1
Glutamate synthase (NADPH)%2C homotetrameric.
  
  
 
0.901
glnA_2
Glutamine synthetase.
  
 
 0.900
CUO77155.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.898
Your Current Organism:
Bacteroides finegoldii
NCBI taxonomy Id: 338188
Other names: B. finegoldii, Bacteroides finegoldii Bakir et al. 2006, DSM 17565, JCM 13345, strain 199
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