Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUP05574.1 | hflX | ERS852397_03403 | ERS852397_03404 | Uncharacterised protein. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.817 |
| CUP05574.1 | xerC_3 | ERS852397_03403 | ERS852397_03405 | Uncharacterised protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.519 |
| hflX | CUP05574.1 | ERS852397_03404 | ERS852397_03403 | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Uncharacterised protein. | 0.817 |
| hflX | xerC_3 | ERS852397_03404 | ERS852397_03405 | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.620 |
| porA_2 | xerC_3 | ERS852397_01843 | ERS852397_03405 | Pyruvate ferredoxin/flavodoxin oxidoreductase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.475 |
| porA_2 | xerD_3 | ERS852397_01843 | ERS852397_02480 | Pyruvate ferredoxin/flavodoxin oxidoreductase. | integrase%2C site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.475 |
| xerC_3 | CUP05574.1 | ERS852397_03405 | ERS852397_03403 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Uncharacterised protein. | 0.519 |
| xerC_3 | hflX | ERS852397_03405 | ERS852397_03404 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.620 |
| xerC_3 | porA_2 | ERS852397_03405 | ERS852397_01843 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.475 |
| xerC_3 | xerD_3 | ERS852397_03405 | ERS852397_02480 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | integrase%2C site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.753 |
| xerD_3 | porA_2 | ERS852397_02480 | ERS852397_01843 | integrase%2C site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.475 |
| xerD_3 | xerC_3 | ERS852397_02480 | ERS852397_03405 | integrase%2C site-specific recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.753 |