STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717135_02686Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_000717135_02685
Unannotated protein.
       0.785
GCA_000717135_00894
Unannotated protein.
    
 0.748
GCA_000717135_02684
Unannotated protein.
       0.650
GCA_000717135_06996
Unannotated protein.
    
 0.621
GCA_000717135_05203
Unannotated protein.
    
  0.616
GCA_000717135_00899
Unannotated protein.
 
  
  0.615
GCA_000717135_05010
Unannotated protein.
  
 
 0.611
GCA_000717135_00898
Unannotated protein.
 
     0.540
GCA_000717135_02683
Unannotated protein.
       0.534
GCA_000717135_02687
Unannotated protein.
  
    0.513
Your Current Organism:
Catenuloplanes japonicus
NCBI taxonomy Id: 33876
Other names: ATCC 31637, Catenuliplanes japonicus, DSM 44102, IFO 14176, JCM 9106, NBRC 14176, VKM Ac-875, strain N381-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.