STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717135_03877Unannotated protein. (270 aa)    
Predicted Functional Partners:
GCA_000717135_03879
Unannotated protein.
 
  0.986
GCA_000717135_03878
Unannotated protein.
 
 
  0.985
GCA_000717135_04919
Unannotated protein.
 
 
  0.967
GCA_000717135_04245
Unannotated protein.
 
 
  0.957
GCA_000717135_03221
Unannotated protein.
 
 
  0.953
GCA_000717135_03731
Unannotated protein.
 
 
  0.953
GCA_000717135_01471
Unannotated protein.
 
 
  0.947
GCA_000717135_02118
Unannotated protein.
 
 
  0.942
GCA_000717135_00653
Unannotated protein.
 
 
  0.941
GCA_000717135_04130
Unannotated protein.
 
 
  0.937
Your Current Organism:
Catenuloplanes japonicus
NCBI taxonomy Id: 33876
Other names: ATCC 31637, Catenuliplanes japonicus, DSM 44102, IFO 14176, JCM 9106, NBRC 14176, VKM Ac-875, strain N381-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.