STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717135_04809Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000717135_04503
Unannotated protein.
  
     0.724
GCA_000717135_04810
Unannotated protein.
       0.714
GCA_000717135_07111
Unannotated protein.
  
     0.640
GCA_000717135_04793
Unannotated protein.
 
 
  0.637
GCA_000717135_04763
Unannotated protein.
  
     0.632
GCA_000717135_04505
Unannotated protein.
 
 
  0.629
GCA_000717135_00963
Unannotated protein.
 
 
  0.619
GCA_000717135_04509
Unannotated protein.
 
  
 0.609
GCA_000717135_04811
Unannotated protein.
       0.609
GCA_000717135_04510
Unannotated protein.
 
  
 0.599
Your Current Organism:
Catenuloplanes japonicus
NCBI taxonomy Id: 33876
Other names: ATCC 31637, Catenuliplanes japonicus, DSM 44102, IFO 14176, JCM 9106, NBRC 14176, VKM Ac-875, strain N381-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.