STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717135_05035Unannotated protein. (490 aa)    
Predicted Functional Partners:
GCA_000717135_05033
Unannotated protein.
 
  
  0.888
GCA_000717135_05037
Unannotated protein.
 
 
  0.816
GCA_000717135_05036
Unannotated protein.
       0.773
GCA_000717135_05034
Unannotated protein.
       0.730
GCA_000717135_00667
Unannotated protein.
   
 
  0.707
GCA_000717135_03025
Unannotated protein.
   
 
  0.707
GCA_000717135_03451
Unannotated protein.
  
 
 0.618
GCA_000717135_07744
Unannotated protein.
  
 
 0.553
GCA_000717135_01001
Unannotated protein.
  
 
 0.552
GCA_000717135_01302
Unannotated protein.
  
 
 0.552
Your Current Organism:
Catenuloplanes japonicus
NCBI taxonomy Id: 33876
Other names: ATCC 31637, Catenuliplanes japonicus, DSM 44102, IFO 14176, JCM 9106, NBRC 14176, VKM Ac-875, strain N381-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.