STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717135_07253Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_000717135_07252
Unannotated protein.
 
 
 0.984
GCA_000717135_01396
Unannotated protein.
 
 
0.983
GCA_000717135_07251
Unannotated protein.
 
 0.976
GCA_000717135_03505
Unannotated protein.
  
  
 
0.972
GCA_000717135_02775
Unannotated protein.
  
  
  0.968
GCA_000717135_02741
Unannotated protein.
  
  
  0.965
GCA_000717135_03243
Unannotated protein.
 
  
 
0.964
GCA_000717135_08561
Unannotated protein.
    
  0.964
GCA_000717135_03498
Unannotated protein.
  
  
  0.958
GCA_000717135_06777
Unannotated protein.
  
  
  0.954
Your Current Organism:
Catenuloplanes japonicus
NCBI taxonomy Id: 33876
Other names: ATCC 31637, Catenuliplanes japonicus, DSM 44102, IFO 14176, JCM 9106, NBRC 14176, VKM Ac-875, strain N381-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.