STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000717135_07884Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000717135_04683
Unannotated protein.
  
     0.768
GCA_000717135_00384
Unannotated protein.
  
     0.759
GCA_000717135_04579
Unannotated protein.
  
     0.757
GCA_000717135_02641
Unannotated protein.
  
     0.748
GCA_000717135_08623
Unannotated protein.
  
     0.740
GCA_000717135_07883
Unannotated protein.
       0.550
GCA_000717135_01519
Unannotated protein.
  
     0.526
GCA_000717135_07885
Unannotated protein.
       0.515
GCA_000717135_07882
Unannotated protein.
       0.493
Your Current Organism:
Catenuloplanes japonicus
NCBI taxonomy Id: 33876
Other names: ATCC 31637, Catenuliplanes japonicus, DSM 44102, IFO 14176, JCM 9106, NBRC 14176, VKM Ac-875, strain N381-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.