STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6122_0463Toxic anion resistance protein. (401 aa)    
Predicted Functional Partners:
A6122_0464
Hypothetical protein.
 
  
 0.960
A6122_0468
Hypothetical protein.
 
     0.955
A6122_0469
Serine/threonine protein kinase.
 
     0.947
A6122_0470
Hypothetical protein.
 
     0.932
A6122_0465
AAA family ATPase.
 
     0.931
A6122_0466
Hypothetical protein.
 
   
 0.930
A6122_0467
Transporter substrate-binding protein.
 
     0.844
A6122_0482
Phosphopeptide-binding protein.
 
     0.797
A6122_0481
Hypothetical protein.
 
     0.794
A6122_0462
Hypothetical protein.
       0.478
Your Current Organism:
Rathayibacter tritici
NCBI taxonomy Id: 33888
Other names: ATCC 11403, CCUG 23914, CIP 104038, Clavibacter tritici, Corynebacterium tritici, DSM 7486, ICMP 2626, JCM 9309, LMG 3728, LMG:3728, Pseudomonas tritici, R. tritici
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.