STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZE17695.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
KZE17637.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.896
KZE11313.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.723
KZE14620.1
Epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
KZE14621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
KZE22278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.460
AVW13_10530
Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.457
KZE22112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
KZE21491.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
KZE20208.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.428
KZE12315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Brevibacterium casei
NCBI taxonomy Id: 33889
Other names: ATCC 35513, B. casei, BCRC 12214, CCM 4100, CCRC 12214, CCRC:12214, CCUG 29001, CDC coryneform group B-1, CDC coryneform group B-3, CIP 102111, DSM 20657, IFO 14812, IMET 10997, JCM 2594, KCTC 3082, KCTC 3085, NBRC 14812, NCDO 2048, NCIMB 702048, VKM Ac-2114
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.