HycQ protein (Mycobacterium tuberculosis variant africanum)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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textmining

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co-expression

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[Homology]

Score

HycQ

Hydrogenase HycQ. (488 aa)

Predicted Functional Partners:

HycE

0.999

RN09_0111

0.999

RN09_0104

0.996

HycP

0.996

HycD

0.994

RN09_0105

0.962

RN09_0106

0.962

NuoL

0.920

RN09_0103

0.793

nuoB

0.569

Your Current Organism:

Mycobacterium tuberculosis variant africanum

NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HycD	HycE	RN09_0107	RN09_0110	Formate hydrogenlyase HycD.	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	0.999
HycD	HycP	RN09_0107	RN09_0108	Formate hydrogenlyase HycD.	Hydrogenase HycP.	0.986
HycD	HycQ	RN09_0107	RN09_0109	Formate hydrogenlyase HycD.	Hydrogenase HycQ.	0.994
HycD	RN09_0103	RN09_0107	RN09_0103	Formate hydrogenlyase HycD.	HTH-type transcriptional regulator.	0.744
HycD	RN09_0104	RN09_0107	RN09_0104	Formate hydrogenlyase HycD.	Oxidoreductase; Overlaps another CDS with the same product name.	0.998
HycD	RN09_0105	RN09_0107	RN09_0105	Formate hydrogenlyase HycD.	Oxidoreductase; Overlaps another CDS with the same product name.	0.989
HycD	RN09_0106	RN09_0107	RN09_0106	Formate hydrogenlyase HycD.	Oxidoreductase; Overlaps another CDS with the same product name.	0.989
HycD	RN09_0111	RN09_0107	RN09_0111	Formate hydrogenlyase HycD.	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	0.999
HycD	nuoB	RN09_0107	RN09_3822	Formate hydrogenlyase HycD.	NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.	0.612
HycE	HycD	RN09_0110	RN09_0107	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Formate hydrogenlyase HycD.	0.999
HycE	HycP	RN09_0110	RN09_0108	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Hydrogenase HycP.	0.999
HycE	HycQ	RN09_0110	RN09_0109	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Hydrogenase HycQ.	0.999
HycE	NuoL	RN09_0110	RN09_3835	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	NADH-quinone oxidoreductase subunit L.	0.759
HycE	RN09_0103	RN09_0110	RN09_0103	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	HTH-type transcriptional regulator.	0.565
HycE	RN09_0104	RN09_0110	RN09_0104	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Oxidoreductase; Overlaps another CDS with the same product name.	0.999
HycE	RN09_0105	RN09_0110	RN09_0105	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Oxidoreductase; Overlaps another CDS with the same product name.	0.999
HycE	RN09_0106	RN09_0110	RN09_0106	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Oxidoreductase; Overlaps another CDS with the same product name.	0.999
HycE	RN09_0111	RN09_0110	RN09_0111	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	0.995
HycE	nuoB	RN09_0110	RN09_3822	Formate hydrogenase HycE; Overlaps another CDS with the same product name.	NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.	0.697
HycP	HycD	RN09_0108	RN09_0107	Hydrogenase HycP.	Formate hydrogenlyase HycD.	0.986