STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN09_0511Membrane protein; Overlaps another CDS with the same product name. (174 aa)    
Predicted Functional Partners:
RN09_0510
Membrane protein; Overlaps another CDS with the same product name.
     0.994
GlnH
Glutamine-binding lipoprotein GlnH.
 
  
 0.980
PknG
Serine/threonine-protein kinase PknG.
 
  
 0.979
RN09_3943
Lipoprotein LpqB.
 
     0.698
FbpC
Diacylglycerol acyltransferase/mycolyltransferase Ag85C.
 
  
 0.634
FbpB
Diacylglycerol acyltransferase/mycolyltransferase Ag85B.
 
  
 0.610
MutT3
8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family.
       0.591
FbpA
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
 
  
 0.565
FbpD
MPT51/MPB51 antigen.
 
  
 0.553
RN09_0470
Hypothetical protein.
 
     0.549
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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