Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RN09_0519Lipoprotein aminopeptidase LpqL; Overlaps another CDS with the same product name. (171 aa)    
Predicted Functional Partners:
LpqL
Lipoprotein aminopeptidase LpqL; Overlaps another CDS with the same product name.
     0.994
ThiS
Sulfur carrier protein ThiS.
 
     0.671
LpqM
Lipoprotein peptidase LpqM.
 
   
 0.629
RN09_1368
Hypothetical protein.
  
 0.530
RN09_1369
Esterase/lipase.
  
 0.530
LipT
Carboxylesterase LipT; Belongs to the type-B carboxylesterase/lipase family.
  
 0.530
LppZ
Lipoprotein LppZ.
  
   
 0.507
RN09_0954
Hypothetical protein.
  
     0.490
RN09_0518
Hypothetical protein.
       0.488
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.462
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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