Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN09_0774Antitoxin VapB5; Antitoxin component of a type II toxin-antitoxin (TA) system. (86 aa)    
Predicted Functional Partners:
vapC-10
Ribonuclease VapC5; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
 
 0.997
RN09_0827
Ribonuclease VapC8.
 
 
 
 0.923
RN09_0735
Ribonuclease VapC4.
   
 
 0.680
RN09_0736
Ribonuclease VapC4.
   
 
 0.680
vapC-39
Ribonuclease VapC47; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
  
 0.672
vapC-38
Ribonuclease VapC46; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
  
 0.629
vapC-20
Ribonuclease VapC35; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
  
 0.572
RN09_0773
Transmembrane protein.
       0.571
RN09_4252
Transmembrane protein.
  
     0.547
RN09_1933
Antitoxin VapB11.
  
   
 0.532
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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