Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RN09_0790(3R)-hydroxyacyl-ACP dehydratase subunit HadB. (142 aa)    
Predicted Functional Partners:
RN09_0617
Hypothetical protein; Belongs to the UPF0336 family.
 0.999
RN09_0789
(3R)-hydroxyacyl-ACP dehydratase subunit HadA; Belongs to the UPF0336 family.
 0.999
RN09_0791
(3R)-hydroxyacyl-ACP dehydratase subunit HadC; Belongs to the UPF0336 family.
 0.999
FabG1
3-oxoacyl-ACP reductase FabG1.
 
 0.978
InhA
NADH-dependent enoyl-[ACP] reductase.
 
 
 0.974
rpmG
50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.801
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
  
 0.777
RN09_2763
3-oxoacyl-ACP synthase 2; Overlaps another CDS with the same product name; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
   
 0.745
KasA
3-oxoacyl-ACP synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      
 0.684
FadD32
long-chain-fatty-acid--AMP ligase FadD32.
     
 0.670
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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