Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MmaA2Cyclopropane mycolic acid synthase MmaA2; Overlaps another CDS with the same product name. (240 aa)    
Predicted Functional Partners:
RN09_0800
Cyclopropane mycolic acid synthase MmaA2; Overlaps another CDS with the same product name.
     0.817
MmaA3
Methoxy mycolic acid synthase MmaA3.
 
  
0.616
RN09_4545
Fatty acid synthase.
 
     0.594
MmaA1
Mycolic acid methyltransferase MmaA1.
 
   
0.577
RN09_0553
Hypothetical protein.
  
 0.553
RN09_0804
Hypothetical protein.
     
 0.475
RN09_0805
Hypothetical protein.
     
 0.475
rplY
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
   
    0.475
LipG
Lipase/esterase LipG.
  
    0.463
MmaA4
Hydroxymycolate synthase MmaA4.
 
   
0.435
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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