Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtsD | RN09_0824 | RN09_0825 | RN09_0824 | Arylsulfatase AtsD. | Antitoxin VapB7. | 0.540 |
AtsD | RN09_0826 | RN09_0825 | RN09_0826 | Arylsulfatase AtsD. | Antitoxin VapB8. | 0.706 |
AtsD | RN09_0827 | RN09_0825 | RN09_0827 | Arylsulfatase AtsD. | Ribonuclease VapC8. | 0.706 |
AtsD | vapC-11 | RN09_0825 | RN09_0823 | Arylsulfatase AtsD. | Ribonuclease VapC7; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.540 |
RN09_0821 | RN09_0822 | RN09_0821 | RN09_0822 | Toxin MazF2. | Antitoxin MazE2. | 0.813 |
RN09_0821 | RN09_0824 | RN09_0821 | RN09_0824 | Toxin MazF2. | Antitoxin VapB7. | 0.429 |
RN09_0821 | vapC-11 | RN09_0821 | RN09_0823 | Toxin MazF2. | Ribonuclease VapC7; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.429 |
RN09_0822 | RN09_0821 | RN09_0822 | RN09_0821 | Antitoxin MazE2. | Toxin MazF2. | 0.813 |
RN09_0822 | RN09_0824 | RN09_0822 | RN09_0824 | Antitoxin MazE2. | Antitoxin VapB7. | 0.577 |
RN09_0822 | vapC-11 | RN09_0822 | RN09_0823 | Antitoxin MazE2. | Ribonuclease VapC7; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.577 |
RN09_0824 | AtsD | RN09_0824 | RN09_0825 | Antitoxin VapB7. | Arylsulfatase AtsD. | 0.540 |
RN09_0824 | RN09_0821 | RN09_0824 | RN09_0821 | Antitoxin VapB7. | Toxin MazF2. | 0.429 |
RN09_0824 | RN09_0822 | RN09_0824 | RN09_0822 | Antitoxin VapB7. | Antitoxin MazE2. | 0.577 |
RN09_0824 | RN09_0826 | RN09_0824 | RN09_0826 | Antitoxin VapB7. | Antitoxin VapB8. | 0.473 |
RN09_0824 | RN09_0827 | RN09_0824 | RN09_0827 | Antitoxin VapB7. | Ribonuclease VapC8. | 0.473 |
RN09_0824 | vapC-11 | RN09_0824 | RN09_0823 | Antitoxin VapB7. | Ribonuclease VapC7; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.896 |
RN09_0824 | vapC-35 | RN09_0824 | RN09_3478 | Antitoxin VapB7. | Ribonuclease VapC43; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.544 |
RN09_0826 | AtsD | RN09_0826 | RN09_0825 | Antitoxin VapB8. | Arylsulfatase AtsD. | 0.706 |
RN09_0826 | RN09_0824 | RN09_0826 | RN09_0824 | Antitoxin VapB8. | Antitoxin VapB7. | 0.473 |
RN09_0826 | RN09_0827 | RN09_0826 | RN09_0827 | Antitoxin VapB8. | Ribonuclease VapC8. | 0.880 |
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