Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN09_0865Mycofactocin biosynthesis glycosyltransferase MftF. (470 aa)    
Predicted Functional Partners:
RN09_0864
Mycofactocin system creatinine amidohydrolase family protein MftE.
 
  
 0.995
RN09_0861
Mycofactocin system protein MftB.
 
   
 0.973
PqqE
Mycofactocin radical SAM maturase MftC.
 
   
 0.973
LldD1
Mycofactocin system heme/flavin oxidoreductase MftD.
 
   
 0.945
RN09_0866
Dehydrogenase.
  
  
 0.895
RN09_0859
Mycofactocin biosynthesis transcriptional regulator MftR.
 
   
 0.868
RN09_0860
Hypothetical protein.
     
 0.805
RN09_1669
Hypothetical protein.
  
  
 0.736
RN09_3343
Dehydrogenase.
  
 
 
 0.685
RN09_2101
Initiation inhibitor protein.
  
 
 0.674
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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