Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
FadE9acyl-CoA dehydrogenase FadE9. (390 aa)    
Predicted Functional Partners:
MmsA
Methylmalonate-semialdehyde dehydrogenase.
 
  0.982
MmsB
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
  
 0.980
FixB
Electron transfer flavoprotein subunit alpha.
 
 0.854
FadB
Fatty oxidation protein FadB.
  
 0.797
FixA
Electron transfer flavoprotein subunit beta.
 
 
 0.789
RN09_2391
acyl-CoA dehydrogenase FadE18; Overlaps another CDS with the same product name.
  
     0.754
EchA9
enoyl-CoA hydratase EchA9.
 
 0.749
FadE27
acyl-CoA dehydrogenase FadE27.
  
     0.734
FadE33
acyl-CoA dehydrogenase FadE33.
  
     0.733
FadE31
acyl-CoA dehydrogenase FadE31; Overlaps another CDS with the same product name.
  
  
 0.699
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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