Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RN09_0973Hypothetical protein. (292 aa)    
Predicted Functional Partners:
RN09_0974
Hypothetical protein.
 
  
 0.991
RN09_0972
Hypothetical protein.
     
 0.932
RN09_0976
Monooxygenase.
 
   
 0.865
RN09_0975
Transcriptional regulator.
 
   
 0.832
RN09_3586
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
  
  
 0.767
RN09_1278
Transposase.
  
     0.632
RN09_4142
Transposase.
  
     0.614
RN09_3599
Transposase.
  
     0.586
RN09_4141
Transposase.
  
     0.549
RN09_3152
Alanine/leucine-rich protein.
  
  
 0.509
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.