Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RN09_1209Adhesion component ABC transporter permease. (101 aa)    
Predicted Functional Partners:
RN09_1210
Adhesion component ABC transporter permease.
     0.968
RN09_1211
Adhesion component ABC transporter permease.
     0.968
RN09_1214
Hypothetical protein.
 
  
 0.960
RN09_1215
Hypothetical protein.
 
  
 0.949
RN09_1212
Adhesion component ABC transporter permease.
 
     0.921
RN09_1213
Adhesion component ABC transporter permease.
 
     0.921
RN09_1208
Adhesion component ABC transporter ATP-binding protein.
 
  
 0.789
clpB
Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
   
    0.510
MoeW
Molybdopterin biosynthesis protein MoeW.
  
     0.473
RN09_3597
PGL/p-HBAD biosynthesis glycosyltransferase.
  
     0.405
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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