Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RN09_0682 | RN09_1373 | RN09_0682 | RN09_1373 | Transmembrane protein. | Hypothetical protein. | 0.774 |
RN09_0682 | RN09_2573 | RN09_0682 | RN09_2573 | Transmembrane protein. | Membrane protein. | 0.756 |
RN09_0682 | RN09_3005 | RN09_0682 | RN09_3005 | Transmembrane protein. | Integral membrane protein. | 0.774 |
RN09_0682 | RN09_3323 | RN09_0682 | RN09_3323 | Transmembrane protein. | Transmembrane protein. | 0.773 |
RN09_0682 | RN09_3895 | RN09_0682 | RN09_3895 | Transmembrane protein. | Hypothetical protein. | 0.773 |
RN09_0682 | RN09_3905 | RN09_0682 | RN09_3905 | Transmembrane protein. | Alanine/valine-rich protein. | 0.774 |
RN09_0682 | RN09_4706 | RN09_0682 | RN09_4706 | Transmembrane protein. | Hypothetical protein. | 0.774 |
RN09_1370 | RN09_1373 | RN09_1370 | RN09_1373 | 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase. | Hypothetical protein. | 0.880 |
RN09_1370 | xseA | RN09_1370 | RN09_1372 | 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.880 |
RN09_1370 | xseB | RN09_1370 | RN09_1371 | 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.884 |
RN09_1373 | RN09_0682 | RN09_1373 | RN09_0682 | Hypothetical protein. | Transmembrane protein. | 0.774 |
RN09_1373 | RN09_1370 | RN09_1373 | RN09_1370 | Hypothetical protein. | 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase. | 0.880 |
RN09_1373 | RN09_2573 | RN09_1373 | RN09_2573 | Hypothetical protein. | Membrane protein. | 0.771 |
RN09_1373 | RN09_3005 | RN09_1373 | RN09_3005 | Hypothetical protein. | Integral membrane protein. | 0.772 |
RN09_1373 | RN09_3323 | RN09_1373 | RN09_3323 | Hypothetical protein. | Transmembrane protein. | 0.773 |
RN09_1373 | RN09_3895 | RN09_1373 | RN09_3895 | Hypothetical protein. | Hypothetical protein. | 0.772 |
RN09_1373 | RN09_3905 | RN09_1373 | RN09_3905 | Hypothetical protein. | Alanine/valine-rich protein. | 0.773 |
RN09_1373 | RN09_4706 | RN09_1373 | RN09_4706 | Hypothetical protein. | Hypothetical protein. | 0.772 |
RN09_1373 | xseA | RN09_1373 | RN09_1372 | Hypothetical protein. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.880 |
RN09_1373 | xseB | RN09_1373 | RN09_1371 | Hypothetical protein. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.880 |
page 1 of 4