LpqY protein (Mycobacterium tuberculosis variant africanum)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LpqY

Trehalose ABC transporter substrate-binding lipoprotein LpqY. (468 aa)

Predicted Functional Partners:

SugA

0.999

SugB

0.999

SugC

0.996

RN09_1524

0.996

UgpC

0.896

RN09_1519

0.851

UgpA

0.833

UspA

0.802

UspB

0.798

RN09_2513

0.789

Your Current Organism:

Mycobacterium tuberculosis variant africanum

NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LpqY	RN09_1519	RN09_1520	RN09_1519	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Transmembrane protein.	0.851
LpqY	RN09_1524	RN09_1520	RN09_1524	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter ATP-binding protein SugC.	0.996
LpqY	RN09_2513	RN09_1520	RN09_2513	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter permease.	0.789
LpqY	SugA	RN09_1520	RN09_1521	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter permease SugA.	0.999
LpqY	SugB	RN09_1520	RN09_1522	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter permease SugB.	0.999
LpqY	SugC	RN09_1520	RN09_1523	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter ATP-binding protein SugC.	0.996
LpqY	UgpA	RN09_1520	RN09_3436	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sn-glycerol-3-phosphate ABC transporter permease UgpA.	0.833
LpqY	UgpC	RN09_1520	RN09_3433	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.	0.896
LpqY	UspA	RN09_1520	RN09_2842	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter permease UspA.	0.802
LpqY	UspB	RN09_1520	RN09_2843	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	Sugar ABC transporter permease UspB.	0.798
RN09_1519	LpqY	RN09_1519	RN09_1520	Transmembrane protein.	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	0.851
RN09_1519	RN09_1524	RN09_1519	RN09_1524	Transmembrane protein.	Sugar ABC transporter ATP-binding protein SugC.	0.750
RN09_1519	SugA	RN09_1519	RN09_1521	Transmembrane protein.	Sugar ABC transporter permease SugA.	0.845
RN09_1519	SugB	RN09_1519	RN09_1522	Transmembrane protein.	Sugar ABC transporter permease SugB.	0.841
RN09_1519	SugC	RN09_1519	RN09_1523	Transmembrane protein.	Sugar ABC transporter ATP-binding protein SugC.	0.750
RN09_1524	LpqY	RN09_1524	RN09_1520	Sugar ABC transporter ATP-binding protein SugC.	Trehalose ABC transporter substrate-binding lipoprotein LpqY.	0.996
RN09_1524	RN09_1519	RN09_1524	RN09_1519	Sugar ABC transporter ATP-binding protein SugC.	Transmembrane protein.	0.750
RN09_1524	RN09_2513	RN09_1524	RN09_2513	Sugar ABC transporter ATP-binding protein SugC.	Sugar ABC transporter permease.	0.725
RN09_1524	SugA	RN09_1524	RN09_1521	Sugar ABC transporter ATP-binding protein SugC.	Sugar ABC transporter permease SugA.	0.995
RN09_1524	SugB	RN09_1524	RN09_1522	Sugar ABC transporter ATP-binding protein SugC.	Sugar ABC transporter permease SugB.	0.999