Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PapA1 | PapA3 | RN09_4676 | RN09_1460 | Acyltransferase PapA. | Acyltransferase PapA. | 0.442 |
PapA1 | RN09_1883 | RN09_4676 | RN09_1883 | Acyltransferase PapA. | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | 0.672 |
PapA1 | RN09_1884 | RN09_4676 | RN09_1884 | Acyltransferase PapA. | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | 0.576 |
PapA1 | RN09_1886 | RN09_4676 | RN09_1886 | Acyltransferase PapA. | Glycosyltransferase. | 0.639 |
PapA3 | PapA1 | RN09_1460 | RN09_4676 | Acyltransferase PapA. | Acyltransferase PapA. | 0.442 |
PapA3 | RN09_1883 | RN09_1460 | RN09_1883 | Acyltransferase PapA. | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | 0.661 |
PapA3 | RN09_1884 | RN09_1460 | RN09_1884 | Acyltransferase PapA. | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | 0.576 |
PapA3 | RN09_1886 | RN09_1460 | RN09_1886 | Acyltransferase PapA. | Glycosyltransferase. | 0.672 |
RN09_1883 | PapA1 | RN09_1883 | RN09_4676 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Acyltransferase PapA. | 0.672 |
RN09_1883 | PapA3 | RN09_1883 | RN09_1460 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Acyltransferase PapA. | 0.661 |
RN09_1883 | RN09_1884 | RN09_1883 | RN09_1884 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | 0.779 |
RN09_1883 | RN09_1885 | RN09_1883 | RN09_1885 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Methyltransferase. | 0.574 |
RN09_1883 | RN09_1886 | RN09_1883 | RN09_1886 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Glycosyltransferase. | 0.454 |
RN09_1883 | WbbL2 | RN09_1883 | RN09_1887 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Rhamnosyl transferase WbbL. | 0.414 |
RN09_1884 | PapA1 | RN09_1884 | RN09_4676 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Acyltransferase PapA. | 0.576 |
RN09_1884 | PapA3 | RN09_1884 | RN09_1460 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Acyltransferase PapA. | 0.576 |
RN09_1884 | RN09_1883 | RN09_1884 | RN09_1883 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | 0.779 |
RN09_1884 | RN09_1885 | RN09_1884 | RN09_1885 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Methyltransferase. | 0.574 |
RN09_1884 | RN09_1886 | RN09_1884 | RN09_1886 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Glycosyltransferase. | 0.454 |
RN09_1884 | WbbL2 | RN09_1884 | RN09_1887 | Transmembrane transport protein MmpL12; Overlaps another CDS with the same product name. | Rhamnosyl transferase WbbL. | 0.414 |
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