STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN09_2005Mannosyltransferase. (522 aa)    
Predicted Functional Partners:
RN09_2679
Alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase.
  
   
 0.883
RN09_0907
anti-sigma-L factor RslA.
  
     0.746
RN09_2560
Hypothetical protein.
  
     0.737
RN09_0061
Membrane protein.
  
     0.719
RN09_1449
Hypothetical protein.
 
     0.694
RN09_2559
Hypothetical protein.
  
     0.676
RN09_1073
Hypothetical protein.
  
     0.655
RN09_3334
Arginine-rich protein.
  
     0.646
RN09_0809
Alpha-mannosidase; Overlaps another CDS with the same product name.
  
     0.641
TB15.3
Iron-regulated universal stress protein.
       0.631
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.