Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cfp17 | PknB | RN09_2252 | RN09_0022 | Glycogen accumulation regulator GarA. | Serine/threonine-protein kinase PknB. | 0.998 |
| Cfp17 | TB15.3 | RN09_2252 | RN09_2007 | Glycogen accumulation regulator GarA. | Iron-regulated universal stress protein. | 0.547 |
| GuaB2 | GuaB3 | RN09_4173 | RN09_4171 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | Oxidoreductase. | 0.984 |
| GuaB2 | RN09_4111 | RN09_4173 | RN09_4111 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | Hypothetical protein. | 0.639 |
| GuaB2 | TB15.3 | RN09_4173 | RN09_2007 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | Iron-regulated universal stress protein. | 0.606 |
| GuaB2 | ffh | RN09_4173 | RN09_3531 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.710 |
| GuaB3 | GuaB2 | RN09_4171 | RN09_4173 | Oxidoreductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | 0.984 |
| GuaB3 | RN09_4111 | RN09_4171 | RN09_4111 | Oxidoreductase. | Hypothetical protein. | 0.610 |
| GuaB3 | TB15.3 | RN09_4171 | RN09_2007 | Oxidoreductase. | Iron-regulated universal stress protein. | 0.585 |
| GuaB3 | ffh | RN09_4171 | RN09_3531 | Oxidoreductase. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.646 |
| PknB | Cfp17 | RN09_0022 | RN09_2252 | Serine/threonine-protein kinase PknB. | Glycogen accumulation regulator GarA. | 0.998 |
| PknB | RN09_1632 | RN09_0022 | RN09_1632 | Serine/threonine-protein kinase PknB. | Hypothetical protein. | 0.418 |
| PknB | RN09_4111 | RN09_0022 | RN09_4111 | Serine/threonine-protein kinase PknB. | Hypothetical protein. | 0.957 |
| PknB | TB15.3 | RN09_0022 | RN09_2007 | Serine/threonine-protein kinase PknB. | Iron-regulated universal stress protein. | 0.577 |
| PknB | ffh | RN09_0022 | RN09_3531 | Serine/threonine-protein kinase PknB. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.589 |
| RN09_1619 | RN09_1632 | RN09_1619 | RN09_1632 | Hypothetical protein. | Hypothetical protein. | 0.754 |
| RN09_1619 | TB15.3 | RN09_1619 | RN09_2007 | Hypothetical protein. | Iron-regulated universal stress protein. | 0.610 |
| RN09_1632 | PknB | RN09_1632 | RN09_0022 | Hypothetical protein. | Serine/threonine-protein kinase PknB. | 0.418 |
| RN09_1632 | RN09_1619 | RN09_1632 | RN09_1619 | Hypothetical protein. | Hypothetical protein. | 0.754 |
| RN09_1632 | TB15.3 | RN09_1632 | RN09_2007 | Hypothetical protein. | Iron-regulated universal stress protein. | 0.683 |
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