STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN09_2135Nitrate reductase-like protein NarX; Overlaps another CDS with the same product name. (76 aa)    
Predicted Functional Partners:
RN09_2137
Nitrate reductase-like protein NarX; Overlaps another CDS with the same product name.
 
 0.991
RN09_2136
Nitrate reductase-like protein NarX; Overlaps another CDS with the same product name.
     0.987
NarH
Nitrate reductase subunit beta.
 
 
 0.986
NarK2
Nitrate/nitrite transporter.
 
  
 0.976
NarG
Nitrate reductase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.970
NarJ
Nitrate reductase subunit delta.
  
 0.963
RN09_2133
Membrane protein.
 
     0.666
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
  
 0.585
RN09_0326
Nitrite extrusion protein NarU; Overlaps another CDS with the same product name.
 
  
 0.561
RN09_2134
Hypothetical protein.
       0.556
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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