RN09_2149 protein (Mycobacterium tuberculosis variant africanum)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

RN09_2149

ABC transporter ATP-binding protein/permease. (641 aa)

Predicted Functional Partners:

PknB

0.907

SucA

0.897

RN09_4111

0.819

RN09_1501

0.625

RN09_1318

0.582

Cut1

0.574

Cut2

0.574

Cut3

0.574

RN09_4256

0.574

Cut5

0.574

Your Current Organism:

Mycobacterium tuberculosis variant africanum

NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cut1	RN09_2149	RN09_2163	RN09_2149	Cutinase.	ABC transporter ATP-binding protein/permease.	0.574
Cut1	RN09_4111	RN09_2163	RN09_4111	Cutinase.	Hypothetical protein.	0.574
Cut2	RN09_2149	RN09_2820	RN09_2149	Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.	ABC transporter ATP-binding protein/permease.	0.574
Cut2	RN09_4111	RN09_2820	RN09_4111	Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.	Hypothetical protein.	0.574
Cut3	RN09_2149	RN09_4225	RN09_2149	Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.	ABC transporter ATP-binding protein/permease.	0.574
Cut3	RN09_4111	RN09_4225	RN09_4111	Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.	Hypothetical protein.	0.574
Cut5	RN09_2149	RN09_4549	RN09_2149	Putative cutinase.	ABC transporter ATP-binding protein/permease.	0.574
Cut5	RN09_4111	RN09_4549	RN09_4111	Putative cutinase.	Hypothetical protein.	0.574
PknB	RN09_2149	RN09_0022	RN09_2149	Serine/threonine-protein kinase PknB.	ABC transporter ATP-binding protein/permease.	0.907
PknB	RN09_4111	RN09_0022	RN09_4111	Serine/threonine-protein kinase PknB.	Hypothetical protein.	0.959
RN09_1318	RN09_2149	RN09_1318	RN09_2149	Hypothetical protein.	ABC transporter ATP-binding protein/permease.	0.582
RN09_1501	RN09_2149	RN09_1501	RN09_2149	Tetronasin ABC transporter ATP-binding protein.	ABC transporter ATP-binding protein/permease.	0.625
RN09_2149	Cut1	RN09_2149	RN09_2163	ABC transporter ATP-binding protein/permease.	Cutinase.	0.574
RN09_2149	Cut2	RN09_2149	RN09_2820	ABC transporter ATP-binding protein/permease.	Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.	0.574
RN09_2149	Cut3	RN09_2149	RN09_4225	ABC transporter ATP-binding protein/permease.	Cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.	0.574
RN09_2149	Cut5	RN09_2149	RN09_4549	ABC transporter ATP-binding protein/permease.	Putative cutinase.	0.574
RN09_2149	PknB	RN09_2149	RN09_0022	ABC transporter ATP-binding protein/permease.	Serine/threonine-protein kinase PknB.	0.907
RN09_2149	RN09_1318	RN09_2149	RN09_1318	ABC transporter ATP-binding protein/permease.	Hypothetical protein.	0.582
RN09_2149	RN09_1501	RN09_2149	RN09_1501	ABC transporter ATP-binding protein/permease.	Tetronasin ABC transporter ATP-binding protein.	0.625
RN09_2149	RN09_4111	RN09_2149	RN09_4111	ABC transporter ATP-binding protein/permease.	Hypothetical protein.	0.819