Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DrrC | RN09_0223 | RN09_3566 | RN09_0223 | Daunorubicin ABC transporter permease DrrC. | Transmembrane protein. | 0.611 |
DrrC | RN09_2150 | RN09_3566 | RN09_2150 | Daunorubicin ABC transporter permease DrrC. | Hypothetical protein. | 0.533 |
DrrC | RN09_3564 | RN09_3566 | RN09_3564 | Daunorubicin ABC transporter permease DrrC. | Daunorubicin ABC transporter permease DrrB. | 0.986 |
RN09_0223 | DrrC | RN09_0223 | RN09_3566 | Transmembrane protein. | Daunorubicin ABC transporter permease DrrC. | 0.611 |
RN09_0223 | RN09_0268 | RN09_0223 | RN09_0268 | Transmembrane protein. | Transmembrane protein. | 0.547 |
RN09_0223 | RN09_1240 | RN09_0223 | RN09_1240 | Transmembrane protein. | Hypothetical protein. | 0.735 |
RN09_0223 | RN09_1682 | RN09_0223 | RN09_1682 | Transmembrane protein. | Sigma factor regulatory protein; Overlaps another CDS with the same product name. | 0.659 |
RN09_0223 | RN09_2150 | RN09_0223 | RN09_2150 | Transmembrane protein. | Hypothetical protein. | 0.683 |
RN09_0223 | RN09_2306 | RN09_0223 | RN09_2306 | Transmembrane protein. | Hypothetical protein. | 0.705 |
RN09_0223 | RN09_2522 | RN09_0223 | RN09_2522 | Transmembrane protein. | Hypothetical protein. | 0.558 |
RN09_0223 | RN09_3564 | RN09_0223 | RN09_3564 | Transmembrane protein. | Daunorubicin ABC transporter permease DrrB. | 0.649 |
RN09_0268 | RN09_0223 | RN09_0268 | RN09_0223 | Transmembrane protein. | Transmembrane protein. | 0.547 |
RN09_0268 | RN09_1240 | RN09_0268 | RN09_1240 | Transmembrane protein. | Hypothetical protein. | 0.683 |
RN09_0268 | RN09_1682 | RN09_0268 | RN09_1682 | Transmembrane protein. | Sigma factor regulatory protein; Overlaps another CDS with the same product name. | 0.533 |
RN09_0268 | RN09_2150 | RN09_0268 | RN09_2150 | Transmembrane protein. | Hypothetical protein. | 0.552 |
RN09_0268 | RN09_2306 | RN09_0268 | RN09_2306 | Transmembrane protein. | Hypothetical protein. | 0.671 |
RN09_0268 | RN09_2522 | RN09_0268 | RN09_2522 | Transmembrane protein. | Hypothetical protein. | 0.595 |
RN09_0415 | RN09_2150 | RN09_0415 | RN09_2150 | Hypothetical protein. | Hypothetical protein. | 0.535 |
RN09_1240 | RN09_0223 | RN09_1240 | RN09_0223 | Hypothetical protein. | Transmembrane protein. | 0.735 |
RN09_1240 | RN09_0268 | RN09_1240 | RN09_0268 | Hypothetical protein. | Transmembrane protein. | 0.683 |
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