Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN09_2160GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase. (172 aa)    
Predicted Functional Partners:
RN09_2688
Alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
     
 0.915
RN09_3201
Phosphatidylinositol mannoside acyltransferase.
  
 
 0.911
TreZ
Malto-oligosyltrehalose trehalohydrolase.
   
 0.760
glgB
1,4-alpha-glucan branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.756
UvrD2
ATP-dependent DNA helicase UvrD.
    
 
 0.684
PimB
GDP-mannose-dependent alpha-mannosyltransferase.
  
     0.648
RN09_3109
Hypothetical protein.
   
 0.548
RN09_1641
Glycogen phosphorylase; Overlaps another CDS with the same product name.
  
 
 0.532
GlgP
Glycogen phosphorylase; Overlaps another CDS with the same product name.
  
 
 0.532
UdgA
UDP-glucose 6-dehydrogenase UdgA.
 
  
 0.520
Your Current Organism:
Mycobacterium tuberculosis variant africanum
NCBI taxonomy Id: 33894
Other names: ATCC 25420, CIP 105147, M. tuberculosis variant africanum, Mycobacterium africanum
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